Structural bioinformatics
- Prinsiples of protein structure .
- Macromolecular structure determination by NMR spectroscopy.
- Molecular visualization.
- The PDB format, mmCIF formats and other data formats.
- Protein structure classification.
- Comparison of protein three-dimensional structures.
Main reading
- C.W.V. Hogue. Structure databases // BIOINFORMATICS: A Practical Guide to the Analysis of Genes and Proteins / A.D. Baxevanis, B.F. Francis Ouellette – 2001 John Wiley & Sons, Inc. – P. 83-107.
- S. Banerjee-Basu, A.D. Baxevanis. Predictive methods using protein sequences // ibid. – P. 253-279.
- J. Heringa. Predicting secondary structure from protein sequences // ibid. – P. 133-141.
Supplementary reading
- M.S. Johnson, J.V.Lehtonen. Comparison of protein three-dimensional structures // Bioinformatics: Sequence, Structure, and Databanks: A Practical Approach / Des Higgins (Editor), Willie Taylor (Editor). – Oxford University Press, 2002. – P. 15-50.
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